Hi Karin,
This tutorial will explain how to find your dicom input file: http://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/Practice Best, Emma ________________________________ From: freesurfer-boun...@nmr.mgh.harvard.edu <freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of Karin Westin <karin.westi...@gmail.com> Sent: Wednesday, April 11, 2018 9:29:37 AM To: freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] DICOM input to recon-all Hi everybody! I'm very new to freesurfer and I'm trying to perform a reconstruction using recon-all. My problem is I don't see how I can access a single file to input to recon-all. I've run dcmunpack -src <path to mri-file> but the only output I get is Found 2 unique series: 4 401 Subject (name of subject) Date (date of examination) Time 110000 Institution (place of acqusition) 4 3DBRAVO+Gd 3.344 8.724 13 0.9375 ROW 195.312 ./EE975AF8 401 refSAGBRAVO+gd 3.344 8.724 13 0.46875 unknown 195.312 ./EEF3A407 <mailto:freesurfer@nmr.mgh.harvard.edu> How do I access the actual files of these series? Best, Karin
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