Dear FreeSurfer experts, I am currently trying to run FreeSurfer on a set of mouse brains and I have a few questions about it:
1. Is it possible to generate 2D surfaces from a set of structural scans on mouse brain in FreeSurfer? 2. Do the individual steps like Normalisation, Segmentation, Tessellation, etc rely on the Talairach space? 3. Is there any way that I can replace the Talairach atlas that the steps use in the root directories or codes? Thank you! Best Regards, Heidi Foo
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