It was deleted but then it was created as a link. Does the link exist?
On 3/7/18 1:33 PM, Krishna Patel wrote:
Hi - I would like to do group analysis on freesurfer data that is
processed with verson 6. However when I try to run
recon-all -s subjid -qcache
I get following error after it runs for some time and generates some
of the files.
ERROR: cannot find surf/lh.white.K
When I look at the log file - I see that this file was deleted. See
following.
total integrated curvature = -1.022*4pi (-12.846) --> 2 handles
ICI = 169.4, FI = 1785.3, variation=28139.036
writing Gaussian curvature to ./lh.white.preaparc.K...done.
writing mean curvature to ./lh.white.preaparc.H...done.
rm -f lh.white.H
ln -s lh.white.preaparc.H lh.white.H
rm -f lh.white.K
ln -s lh.white.preaparc.K lh.white.K
Does anyone have any idea of what might be the issue here?
Thanks,
-Krishna
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