(Thanks for your feedback to my previous inquiry - I've resolved this problem)
I'm running FsFastPreProc on a dataset with a number of subjects, where each subject has two sessions. There's a separate structural image taken in each session. I want to make sure each subject's functional data is registered to the correct structural image. When running fsfast, setting up the file structure I can see clearly how FsFast uses the subjectname file to identify the right subject. It also seems easy enough to register multiple T1 images - just include multiple inputs for each subject to the *recon-all* command. But how do I map the session to the appropriate T1 image in the structural data? Also, if I were registering feat directories to structural using reg-feat2anat - how would I specify the session in that case? Does this even matter? Perhaps FSFastPreProc is built to process images without having a T1 from the same session as each image. If there's not an easy way to do this, would a suitable workaround be to create a separate anatomical subject folder for every subject*session? Thanks very much for your help! Best regards Ben _______________________ Ben Smith, MSc. Ph.D. Candidate University of Southern California https://bjsmith.github.io/ w | +1 213-740 7851 m | +1 323-385 9349 skype | ben.smith.nz
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