Yes the aseg.mgz has many issues towards the anterior regions, specifically on the right side. Would this be fixed by manually editing the putamen aseg, etc.? And would this then subsequently resolve the surface issues?
> On Dec 31, 2017, at 3:06 PM, Douglas Greve <gr...@nmr.mgh.harvard.edu> wrote: > > Did you check the aseg.mgz? It looks like the anterior portions of right > putamen, caudate, ventricle were not labeled properly. > > On 12/22/17 1:29 PM, Romella Durrani wrote: >> Hi, >> >> I'm having problems with the surfaces along the midline for one scan. I have >> attached pictures of the brainmask with surfaces, wm.mgz, and T1 (before any >> of my edits). I have tried to fix this by adding control points and also >> tried to fix it by editing the wm.mgz file to fix the ventricle problem, >> however, none of these edits have resolved the issue. >> >> Thanks! >> >> >> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it is > addressed. If you believe this e-mail was sent to you in error and the e-mail > contains patient information, please contact the Partners Compliance HelpLine > at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail.
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