Hi Vidhu, You could use mri_vol2label or mri_binarize ( check freesurfer site or help in terminal for details ) Cheers On Tue, Oct 3, 2017 at 11:05 AM Vidhu Agrawal <[email protected]> wrote:
> Respected Sir, > > I meant to ask that if i want to separate for example hippocampus and view > as a separate volume what code should i implement? > > On Mon, Oct 2, 2017 at 6:44 PM, Bruce Fischl <[email protected]> > wrote: > >> what do you mean by separate? Extract into a separate volume? If so, you >> can use mri_extract_labels or mri_binarize with the --match flag. >> >> cheers >> Bruce >> On Mon, 2 >> Oct 2017, Vidhu Agrawal wrote: >> >> > how to separate any sub cortical region in freesurfer ? >> > >> > >> _______________________________________________ >> Freesurfer mailing list >> [email protected] >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> >> The information in this e-mail is intended only for the person to whom it >> is >> addressed. If you believe this e-mail was sent to you in error and the >> e-mail >> contains patient information, please contact the Partners Compliance >> HelpLine at >> http://www.partners.org/complianceline . If the e-mail was sent to you >> in error >> but does not contain patient information, please contact the sender and >> properly >> dispose of the e-mail. >> >> > _______________________________________________ > Freesurfer mailing list > [email protected] > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it > is > addressed. If you believe this e-mail was sent to you in error and the > e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. >
_______________________________________________ Freesurfer mailing list [email protected] https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
