Hello, I ran a longitudinal analysis cortical structure in Freesurfer version 5.3. I'd now like to compute hippocampus subfields using the new beta version of the "Segmentation of hippocampal subfields and nuclei of the amygdala" tool (https://surfer.nmr.mgh.harvard.edu/fswiki/HippocampalSubfieldsAndNucleiOfAmygdala).
I'm running into several errors when running segmentHA_T1_long.sh. Upon closer inspection of the script, it's not clear to me whether this tool is compatible with scans processed in the 5.3 version of the longitudinal pipeline. Can you please confirm? Thanks, Lara _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
