thanks Jason
does that directory exist? What happens if you try to ls it?
Bruce
On Wed, 30 Aug
2017, Ledesma, Jason wrote:
Hi Bruce,
Here is the command that I tried and the resulting output/error message:
fsuser@xubuntu-VirtualBox:~$ export TUTORIAL_DATA=C:\tutorial data
fsuser@xubuntu-VirtualBox:~$ export
SUBJECTS_DIR=$TUTORIAL_DATA/buckner_data/tutorial_subjs
fsuser@xubuntu-VirtualBox:~$ cd $SUBJECTS_DIR
bash: cd: C:tutorial/buckner_data/tutorial_subjs: No such file or directory
fsuser@xubuntu-VirtualBox:~$ ^C
fsuser@xubuntu-VirtualBox:~$
Sincerely,
Jason Ledesma
Staff Research Associate
Phone: 1(424)571-7755
E-mail: jason.lede...@labiomed.org
____________________________________________________________________________________________________
From: freesurfer-boun...@nmr.mgh.harvard.edu
<freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of
Bruce Fischl <fis...@nmr.mgh.harvard.edu>
Sent: Wednesday, August 30, 2017 1:24:12 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] Freesurfer Preliminary Questions
Hi Jason
in general it is much easier for us if you can cut and paste text into
the email. Pictures are useful for showing things in the data and such
cheers
Bruce
On
Wed, 30 Aug 2017, Ledesma, Jason wrote:
>
> Hi Bruce,
>
>
> Thank you for your quick response. Attached are photos in number order which
should help to
explain my situation. The first three photos depict the tutorial data as
> they are downloaded into my computer. Photo 4 illustrates the version of
Freesurfer that I am
using. Photos 5 and 6 express how the downloaded tutorial data folder has
> been shared to Freesurfer. Photo 7 illustrates an example of the commands I
have used. I have
tried other pathways as well but am still unsure which the proper command
> should be. Unix is in fact new to me. Let me know if you require any other
details. Looking
forward to hearing your thoughts.
>
>
> Sincerely,
>
> Jason Ledesma
> Staff Research Associate
> Phone: 1(424)571-7755
> E-mail: jason.lede...@labiomed.org
>
>___________________________________________________________________________________________________
_____________________________________________________________________
> From: freesurfer-boun...@nmr.mgh.harvard.edu
<freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of
Bruce Fischl <fis...@nmr.mgh.harvard.edu>
> Sent: Wednesday, August 30, 2017 12:10:24 PM
> To: Freesurfer support list
> Subject: Re: [Freesurfer] Freesurfer Preliminary Questions
> Hi Jason
>
> can you elaborate about what you mean by you "cannot interact with the
> data"?
>
> In general, please send us the full command you ran and all its screen
> output including whatever errros you encountered
>
> cheers
> Bruce
> On
> Wed, 30 Aug 2017, Ledesma, Jason wrote:
>
> >
> > To whom it may concern,
> >
> >
> > I am to attend the upcoming Freesurfer course session in Boston, and I
would like to ask a few
preliminary questions. I am currently attempting to run Freesurfer 5.3
> > on a windows unit via the Oracle VM VirtualBox Manager. I have tried to
follow the instructions
of the tutorial thus far, but am having trouble properly downloading
> the
> > tutorial data into Freesurfer (the data I am attempting to acquire can
be found at
http://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/OutputData_freeview). I have
> > tried setting up a shared folder and placing the data in a "Machine
Folder", but I still cannot
interact with the data. Do you know why this may be? I see that a
> > license key must first be obtained in some instances; perhaps this is the
reason there are
issues. Also, what is the best way to download the most recent version of
> > Freesurfer on windows? Thank you.
> >
> >
> > Sincerely,
> >
> > Jason Ledesma
> > Staff Research Associate
> > Phone: 1(424)571-7755
> > E-mail: jason.lede...@labiomed.org
> >
>>__________________________________________________________________________________________________
_____________________________________________________________________
> _
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