Dear experts,

I’m new to analysis with use of the Freesurfer.
I compared grey matter thickness between two groups using Qdec with
several covariates (i.e. nuisance factors) such as age, gender and
intracranial volume (ICV). I found regions that significantly differed
between the two groups. I would like to ask about how to extract data in
these regions in each subject related with the effect of groups after
effects of covariates were removed.

On the discussion forum, I found the solutions to extract raw data in the
ROIs. But in the communication, they did not discuss about how to remove
covariate’s effects. I would appreciate if you could let me know
about how to extract values related with the effect of group or how to
remove covariate’s effects from raw data.

Thank you for your guidance!

Best,
Hiroki

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