Hi all, I am running TRACULA on free surfer 6.0.0 and have done the 1st and 2nd 
step and am getting stuck on the last step with the following error.

Loading atlas reference volume from 
/data/picsl/mackey_group/BPD/surfaces/BPD0067A/dlabel/mni/lh.cst_AS_avg33_mni_bbr_end1_dil.nii.gz
niiRead(): error opening file 
/data/picsl/mackey_group/BPD/surfaces/BPD0067A/dlabel/mni/lh.cst_AS_avg33_mni_bbr_end1_dil.nii.gz
ERROR: Could not read 
/data/picsl/mackey_group/BPD/surfaces/BPD0067A/dlabel/mni/lh.cst_AS_avg33_mni_bbr_end1_dil.nii.gz
Linux compute-0-12.local 2.6.32-642.15.1.el6.x86_64 #1 SMP Fri Feb 24 14:31:22 
UTC 2017 x86_64 x86_64 x86_64 GNU/Linux

This file is not in the dlabel/mni folder- is this because of something going 
wrong in the 1st and 2nd steps? Or could it be a problem with loading the atlas 
reference volume? I have tried this with multiple subjects and am getting the 
same issue for each one.

Any help would be appreciated.

Thanks,
Katrina





Katrina Simon
Research Specialist- Mackey Lab
University of Pennsylvania Department of Psychology
katsi...@sas.upenn.edu<mailto:katsi...@sas.upenn.edu>
(215) 573-1670

_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer


The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.

Reply via email to