Yes.
On 05/22/2017 11:03 AM, Elijah Mak wrote: > Thanks Doug. Just to confirm do I get this voxels number from the > cluster summary text file then? > > Best Wishes, > Elijah > > *Dr. Elijah Mak, Research Associate* > Department of Psychiatry, Old Age Psychiatry Group > University of Cambridge > Trinity College, CB21TQ, UK > http://www.neuroscience.cam.ac.uk/directory/profile.php?fkm24 > > > On 22 May 2017 at 15:49:16, Douglas N Greve (gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu>) wrote: > >> There is not a straight-forward way to do it as mri_glmfit-sim only >> takes a clusterwise p-value threshold. You can change that until you get >> 20 voxels. >> >> >> On 05/21/2017 09:48 AM, Elijah Mak wrote: >> > Hi Everyone, >> > >> > How may I threshold the sig.mgh (p<0.001) with a cluster extent K > 20 >> > voxels? Is it possible to do this in Freesurfer? >> > >> > Thanks. >> > >> > Best Wishes, >> > Elijah >> > >> > *Dr. Elijah Mak, Research Associate* >> > Department of Psychiatry, Old Age Psychiatry Group >> > University of Cambridge >> > Trinity College, CB21TQ, UK >> > http://www.neuroscience.cam.ac.uk/directory/profile.php?fkm24 >> > >> > >> > >> > _______________________________________________ >> > Freesurfer mailing list >> > Freesurfer@nmr.mgh.harvard.edu >> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> -- >> Douglas N. Greve, Ph.D. >> MGH-NMR Center >> gr...@nmr.mgh.harvard.edu >> Phone Number: 617-724-2358 >> Fax: 617-726-7422 >> >> Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting >> FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 >> www.nmr.mgh.harvard.edu/facility/filedrop/index.html >> Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ >> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> >> The information in this e-mail is intended only for the person to >> whom it is >> addressed. If you believe this e-mail was sent to you in error and >> the e-mail >> contains patient information, please contact the Partners Compliance >> HelpLine at >> http://www.partners.org/complianceline . If the e-mail was sent to >> you in error >> but does not contain patient information, please contact the sender >> and properly >> dispose of the e-mail. >> > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
