Same as with any other input file type. See our tutorials
On 03/02/2017 11:30 AM, yusif Al-kheder wrote: > Thank you, > How would I go on about using the segmentation with nifti mri files. > > Youssif > >> On Mar 2, 2017, at 11:24 AM, Douglas N Greve <gr...@nmr.mgh.harvard.edu> >> wrote: >> >> >> >>> On 03/02/2017 11:18 AM, yusif Al-kheder wrote: >>> Hello, >>> Is it possible to segment the brain into these parts if possible using >>> freesurfer; >>> Cerebellum -- yes >>> Midbrain -- not really (something called ventral diencphalon that overlaps >>> a little) >>> Pons -- no, but it is a target we will have in the future >>> Medulla Oblongata - no >>> Hippocampus -- yes >>> Thalamus -- yes >>> Hypothalamus -- no >>> Anterior and Posterior Commissura -- no >>> Corpus Callosum -- yes >>> Hypophysis -- no >>> Dura Mater -- no >>> >>> Youssif >>> _______________________________________________ >>> Freesurfer mailing list >>> Freesurfer@nmr.mgh.harvard.edu >>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >>> >>> >> -- >> Douglas N. Greve, Ph.D. >> MGH-NMR Center >> gr...@nmr.mgh.harvard.edu >> Phone Number: 617-724-2358 >> Fax: 617-726-7422 >> >> Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting >> FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 >> www.nmr.mgh.harvard.edu/facility/filedrop/index.html >> Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ >> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> >> The information in this e-mail is intended only for the person to whom it is >> addressed. If you believe this e-mail was sent to you in error and the e-mail >> contains patient information, please contact the Partners Compliance >> HelpLine at >> http://www.partners.org/complianceline . If the e-mail was sent to you in >> error >> but does not contain patient information, please contact the sender and >> properly >> dispose of the e-mail. >> > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
