v6 will recognize and use all the manual edits from previous versions. I don't think you need to copy aseg.mgz to aseg.presurf.mgz
On 03/01/2017 11:32 PM, Chris Adamson wrote: > Is it possible to run Freesurfer 6.0 recon-all -all on a subject > previously processed with 5.3 and have 6 utilise the wm, ctrl pt and > pial edits (brainmask.finalsurfs.manedit.mgz) made in the 5.3 output? > Would it be ok to run -autorecon2-wm -autorecon3 after renaming > aseg.mgz to aseg.presurf.mgz? > > Thanks in advance? > > *Dr **Chris Adamson > *Research Officer, Developmental Imaging, *Murdoch Childrens Research > Institute > *Murdoch Childrens Research Institute > Royal Children’s Hospital > Flemington Road, Parkville, Victoria 3052, Australia > www.mcri.edu.au <http://www.mcri.edu.au/> > > E chris.adam...@mcri.edu.au > T 03 9936 6780 > > > ______________________________________________________________________ > This email has been scanned by the Symantec Email Security.cloud service. > For more information please visit http://www.symanteccloud.com > ______________________________________________________________________ > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
