Hello Freesurfer,
I have couple questions.
1) If I have 2 commands (e.g., mri_normalize -a 30 and mris_inflate -n 30)
and I want recon-all to execute both commands. Should I create 2 different
expert opts files or 1 expert opts file with both commands in it? Also, how
do I include the expert flag with recon?
2) If I have added control points and wm edits to a subject, it is accurate
to start from control points? i.e., recon-all -autorecon2-cp -autorecon3
3) Lastly, I am playing around with mri_fill command and I did like to know
what -T flag does?
Thank you
Best,
Paul
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