Thank you, we did that, and it was indeed an issue with the way we ran it. Diana
> El 9 feb 2017, a las 18:19, Douglas Greve <gr...@nmr.mgh.harvard.edu> > escribió: > > It says that it was "Killed" which sounds like the job exceeded some resource > on the supercomputer. You should contact the administrators to see what the > limits are and whether you exceeded them. You can also run the same subject > on a regular computer and see if it dies in the same place. > >> On 2/9/17 5:40 AM, Diana Tordesillas-Gutiérrez wrote: >> >> Dear FreeSurfer developers, >> >> I am a new FreeSurfer user and I am trying to run it in a supercomputer for >> the first time. >> >> Recon-all finished with errors (see log attached) during skull stripping. >> >> I have searched the archives and only found that it could be a memory >> problem, but I am unsure about this. >> >> The version of freesurfer is: >> freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2 >> >> Thank you for your help, >> Diana >> >> -------------------------------------------------------- >> >> Diana Tordesillas Gutiérrez, PhD >> Neuroimaging Unit IDIVAL >> IDIVAL Building >> Avda. Cardenal Herrera Oria s/n >> 39011 Santander >> Spain >> Tel. +34 942202677 >> diana.tordesil...@humv.es >> diana.tordesil...@gmail.com >> >> ---------------------------------------------------------- >> >> >> >> >> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it is > addressed. If you believe this e-mail was sent to you in error and the e-mail > contains patient information, please contact the Partners Compliance HelpLine > at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail.
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