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hello doug, Thank you. 1) where can i find this lta file? I looked for it in the mri and surface folders but it wasn't there. do i need to run another command in order to generate it? 2) Is this the right command? mri_compute_volume_fractions --o pvf --reg filename.lta (location of .lta) 3)Also, Is there a command that converts the results from mri_compute_volume_fractions (which is the volume fraction map) into probability map? 3) I searched the forum and various posts mentioned using mri_ca_label to create probablity maps of tissue segmentations (e.g., https://mail.nmr.mgh.harvard.edu/pipermail//freesurfer/2016-July/046425.html). Is this truth? If yes, is it possible to use it with mri_compute_volume_fractions or not? Thank you, Paul. On Thu, Jan 26, 2017 at 6:24 PM, Douglas N Greve <gr...@nmr.mgh.harvard.edu> wrote: Run it something like | ||
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