no, you just include demographics/diagnosis/etc in the qdec file. You 
should be able to select the dependent measure from the qdec control panel


On 01/23/2017 05:58 AM, André Schmidt wrote:
> Dear FS experts
>
> I want to perform a 2-sample test on my LGI data using qdec (whole 
> brain analysis with potential covariates). I already ran the recon-all 
> -s my_subject_id -qcache -measure pail_lgi command for each of the 
> subjects and included pial_lgi as measure in the QDEC Design tab.
>
> However, it is not clear to me how I need to create the qdec.table.dat 
> file with the output from recon-all -s my_subject_id -qcache -measure 
> pail_lgi. Do I need the lh/rh.pial_lgi.fsaverage.mgh files, and if 
> yes, how can I extract the information from these files?
>
> Many thanks for your help!
> Best wishes
> André
>
>
>
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