Ok, if you also send me the first file, /media/Data/Temple/Temple_Tracula/31313422_10128/dmri/dwi.ecclog, I'll see if I can replicate the error.
________________________________ From: freesurfer-boun...@nmr.mgh.harvard.edu [freesurfer-boun...@nmr.mgh.harvard.edu] on behalf of Katherine Damme [katherine.da...@gmail.com] Sent: Tuesday, December 13, 2016 9:21 AM To: Freesurfer support list Subject: Re: [Freesurfer] Tracula Set: No Match Yes. I immediately tried to enter the command in manually, checked the paths, and looked at the command manual for any format errors. [ksd770@katelinux Temple_Tracula]$ xfmrot /media/Data/Temple/Temple_Tracula/31313422_10128/dmri/dwi.ecclog /media/Data/Temple/Temple_Tracula/31313422_10128/dmri/bvecs.norot /media/Data/Temple/Temple_Tracula/31313422_10128/dmri/bvecs set: No match. On Wed, Dec 7, 2016 at 2:41 PM, Yendiki, Anastasia <ayend...@mgh.harvard.edu<mailto:ayend...@mgh.harvard.edu>> wrote: Thanks. This looks fine. When you run that xfmrot command directly on the linux command line, do you get the same error? ________________________________ From: freesurfer-boun...@nmr.mgh.harvard.edu<mailto:freesurfer-boun...@nmr.mgh.harvard.edu> [freesurfer-boun...@nmr.mgh.harvard.edu<mailto:freesurfer-boun...@nmr.mgh.harvard.edu>] on behalf of Katherine Damme [katherine.da...@gmail.com<mailto:katherine.da...@gmail.com>] Sent: Wednesday, December 07, 2016 12:41 PM To: Freesurfer support list Subject: Re: [Freesurfer] Tracula Set: No Match On Mon, Dec 5, 2016 at 12:00 PM, Yendiki, Anastasia <ayend...@mgh.harvard.edu<mailto:ayend...@mgh.harvard.edu>> wrote: Hi Katherine - The error occurs when processing this file: /media/Data/Temple/Temple_Tracula/31313422_10128/dmri/bvecs.norot Can you send this file? Thanks! a.y ________________________________ From: Katherine Damme [katherine.da...@gmail.com<mailto:katherine.da...@gmail.com>] Sent: Saturday, December 03, 2016 3:42 PM To: Freesurfer support list; Anastasia Yendiki Subject: Tracula Set: No Match Hello! I have been getting a "set: No match." error. I haven't been able to sort out what is causing it. Attached you will find the configuration file, command, and log files associated with this error. "mv -f /media/Data/Temple/Temple_Tracula/31313422_10128/dmri/bvecs /media/Data/Temple/Temple_Tracula/31313422_10128/dmri/bvecs.norot xfmrot /media/Data/Temple/Temple_Tracula/31313422_10128/dmri/dwi.ecclog /media/Data/Temple/Temple_Tracula/31313422_10128/dmri/bvecs.norot /media/Data/Temple/Temple_Tracula/31313422_10128/dmri/bvecs set: No match." _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu<mailto:Freesurfer@nmr.mgh.harvard.edu> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu<mailto:Freesurfer@nmr.mgh.harvard.edu> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
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