Yes, sorry, it is aparcstats2tabel:) Do you have any idea where is the corpuscallosum information???
Thanks in advance ________________________________ De : freesurfer-boun...@nmr.mgh.harvard.edu <freesurfer-boun...@nmr.mgh.harvard.edu> de la part de Douglas N Greve <gr...@nmr.mgh.harvard.edu> Envoyé : lundi 5 décembre 2016 18:05 À : freesurfer@nmr.mgh.harvard.edu Objet : Re: [Freesurfer] aparcstat2label command result does not include corpuscallosum label Do you mean aparcstats2table? On 12/05/2016 10:15 AM, Hao wen wrote: > > Hello, freesurfer experts: > > I have a question, recently, I use the aparcstats2label comamnd, and > get the result file, and I use tksurfer to display the desikan > atlas(?h.aparc.annot), and I want to corresponds the labels between > this two, but in my aparcstats2label result file, i can not find the > corpuscallosum which is the No.4 label in tksurfer, to bespecific, > here is the label ID in desikan atlas in tksurfer: > > > aparc_lables= ['unknown', 'bankssts', 'caudalanteriorcingulate', > 'caudalmiddlefrontal', 'corpuscallosum', 'cuneus', 'entorhinal', > 'fusiform', 'inferiorparietal', 'inferiortemporal', > 'isthmuscingulate', 'lateraloccipital', 'lateralorbitofrontal', > 'lingual', 'medialorbitofrontal', 'middletemporal', 'parahippocampal', > 'paracentral', 'parsopercularis', 'parsorbitalis', 'parstriangularis', > 'pericalcarine', 'postcentral', 'posteriorcingulate', 'precentral', > 'precuneus', 'rostralanteriorcingulate', 'rostralmiddlefrontal', > 'superiorfrontal', 'superiorparietal', 'superiortemporal', > 'supramarginal', 'frontalpole', 'temporalpole', 'transversetemporal', > 'insula'] > which has 36 labels, and I dont understand which label is unknow.... > on the contrary, the result from aparcstat2table have 36 > columns(includint subject_id and meanthickness), > so bacially, they have just 34 labels add one 'unknown', it should > have 35 labels, but I did not find the lable > 'corpuscallosum', Can someone help me??? > The result file for aparcstat2table file is attached:) > Thanks in advance > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer Freesurfer Info Page - Harvard University<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> mail.nmr.mgh.harvard.edu To see the collection of prior postings to the list, visit the Freesurfer Archives. A searchable archive which of messages PRIOR to March 2004 is at ... -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 FileDrop v2.0 - Martinos Center for Biomedical Imaging<https://gate.nmr.mgh.harvard.edu/filedrop2> gate.nmr.mgh.harvard.edu Filedrop is for sending files work-related files up to 2GiB; For files over 2GiB, please use the Accellion File Transfer from Partners; Filedrop is not a secure ... www.nmr.mgh.harvard.edu/facility/filedrop/index.html<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
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