Hi Greve

Thanks for your reply, can I have more detail about how to solve my
problem. By the way, I may not think it's the problem about covariates.

Thank you.
Jin

2016-09-28 15:29 GMT-04:00 Douglas Greve <gr...@nmr.mgh.harvard.edu>:

> Try normalizing your covariates (ie, subtract the mean and divide by the
> stddev).
>
> On 9/28/16 3:07 PM, kinson li wrote:
>
> Hi there,
>
> Anyone can help me out?  Thank you.
>
> 2016-09-28 13:46 GMT-04:00 kinson li <kinson...@gmail.com>:
>
>> *Hello,*
>>
>> *I would like to conduct an analysis using mri_glmfit but I'm getting
>> this error:*
>>
>> *ERROR: matrix is ill-conditioned or badly scaled, condno = 1e+08*
>>
>> *I am appreciated you can help me solve this problem. *
>>
>> *My command was:*
>>
>> mri_glmfit --y age9vs8ml01.mgh --fsgd new.fsgd dods --C
>> age9vs8mlmatrix.mtx --surf fsaverage lh --cortex  --glmdir glmdir.age9vs8ml
>>
>>
>> Design matrix ------------------
>>
>>  1.000   0.000   8.000   0.000;
>>
>>  1.000   0.000   8.000   0.000;
>>
>>  1.000   0.000   8.000   0.000;
>>
>>  1.000   0.000   8.000   0.000;
>>
>>  1.000   0.000   8.000   0.000;
>>
>>  1.000   0.000   8.000   0.000;
>>
>>  1.000   0.000   8.000   0.000;
>>
>>  1.000   0.000   8.000   0.000;
>>
>>  1.000   0.000   8.000   0.000;
>>
>>  1.000   0.000   8.000   0.000;
>>
>>  1.000   0.000   8.000   0.000;
>>
>>  1.000   0.000   8.000   0.000;
>>
>>  1.000   0.000   8.000   0.000;
>>
>>  1.000   0.000   8.000   0.000;
>>
>>  1.000   0.000   8.000   0.000;
>>
>>  1.000   0.000   8.000   0.000;
>>
>>  1.000   0.000   8.000   0.000;
>>
>>  1.000   0.000   8.000   0.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>>  0.000   1.000   0.000   9.000;
>>
>> --------------------------------
>>
>> ERROR: matrix is ill-conditioned or badly scaled, condno = 1e+08
>>
>> --------------------------------
>>
>>
>> Thanks
>>
>> Jincheng.
>>
>>
>
>
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