Hi Doug, Thank you. I ran sampled the data and ran mri_glmfit as you suggested, although the resulting bp file seems to only have binary clusters (in the attached image the red cluster all have a value of 1 and everywhere else is 0). Is this the normal output? I expected a more varying map.
Thanks Jonathan
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.