Dear Freesurfer Developers, I am fairly new to image analysis and this is the first time I use Freesurfer.
I have some DTI data and I have already preprocessed them and ran bedpostX using FSL. I ran probabilistic tractography on FSL as well to get the connectivity between two distinct brain areas. I am also interested in getting the probability distribution for the uncinate fasciculi so I am trying to use TRACULA. My question is: Can I use TRCULA without doing preprocessing and dedpostX again? If so, will I need to do the cortical parcelation and subcortical segmentation with recon-all and get the aparc+aseg.mgz file in order to use TRACULA? Which argument would I need to use when I run recon-all? Thank you! *Athanasia Metoki* Psychology Doctoral Student - Brain and Cognitive Sciences Program Cognitive Neuroscience Laboratory Temple University Department of Psychology 1701 N 13th St. Philadelphia, PA 19122 Email: athanasia.met...@temple.edu _______________________________________________________________________________ The contents of this email message and any attachments are intended solely for the addressee(s) and may contain confidential and/or privileged information and may be legally protected from disclosure. If you are not the intended recipient of this message or their agent, or if this message has been addressed to you in error, please immediately alert the sender by reply email and then delete this message and any attachments. If you are not the intended recipient, you are hereby notified that any use, dissemination, copying, or storage of this message or its attachments is strictly prohibited.
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