Re: [Freesurfer] brain mask and T1 are not the same size

[Isabelle Deschamps]

I also tried on a different computer with a different operating system (Yosemite) the manual corrections for the skull stripping and the same problem persists (dimension of the modified T1 changes to 255 x 255 x 256). Any ideas regarding how I can do these modifications for those 4 participants? Thank you in advance for your help, Isabelle ***************************************** Isabelle Deschamps, Chercheure postdoctorale, Faculté de Médecine Département de réadaptation Université Laval Pavillon Ferdinand-Vandry  1050 avenue de la Médecine Québec (Québec)  G1V 0A6    Centre de Recherche de l'Institut universitaire en santé mentale de Québec (CRIUMSQ)  2601, chemin de la Canardière, bureau F-2424A  Québec (Québec) G1J 2G3  Téléphone : 418 663-5000 poste 6857 On Aug 5, 2016, at 12:00 PM, freesurfer-requ...@nmr.mgh.harvard.edu wrote: TRACULA tract endpoints on cortical surface (Barbara Kreilkamp)   4. recent problems with hippocampal subfield and brainstem      modules (Iglesias, Eugenio)   5. Registration of low-resolution EPI time series to CVS MNI      (avoiding resampling) (Heidi Grohn)   6. Spearman correlation in FreeSurfer (martina.papme...@puk.unibe.ch)   7. Error using LGI script despite making suggested changes to      Matlab script. (Sam Mathias)   8. Re: Spearman correlation in FreeSurfer (Douglas N Greve)   9. Re: How does Optseq

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