Hi 

I have two groups I want to compare, in total 172 scans
Of these 78 got a a follow up. Groups are approximately evenly distributed.

I want to do first a cross sectional comparison and subsequently a longitudinal 
analysis for the 78 subjects only.

My question is: 
(1) Is it is valid to analyse all data using the longitudinal processing stream 
( e.g. recon-all -all, recon-all -base, recon-all -long), even though I do 
separate  cross sectional and longitudinal analyses? Or (2) should I analyse 
first the 175 using the cross sectional stream and then separately analyse the 
78 with a follow up scan with the longitudinal stream?


Of course I would prefer option 1 as that would reduce potential 
editing/adjusting

many thanks in advance
William




 
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