Hello Siya,

What version of perl is on your ubuntu system?

   $> perl --version

-Zeke

On 06/05/2016 04:30 PM, siya sherif wrote:
>
>
> FREESURFER_HOME: /usr/local/freesurfer
>
> Build stamp: freesurfer-Linux-centos6_x86_64-stable-pub-v5.3.0
>
> Debian version: jessie/sid
>
> Kernel info: Linux 4.2.0-36-generic x86_64
>
> ---------------------------------------------------------------------
> Please include the following additional information in your report:
>
>    1) subject name
> bret4
>
>    2) the entire command-line executed
> setenv SUBJECTS_DIR /media/brain/C60E9D2E0E9D188F/testFreesurfur
> recon-all -i
> ICBM_MNI_0101_MRI_T1-FFE_br_20050118145643139_S6730_I2233.nii -subject
> bert3 -all
>
>
>    3) the error message generated
>
> #--------------------------------------------
> #@# Talairach Fri Jun  3 14:54:45 IST 2016
> /media/brain/C60E9D2E0E9D188F/testFreesurfur/bert5/mri
>
>   mri_nu_correct.mni --n 1 --proto-iters 1000 --distance 50 --no-rescale
> --i orig.mgz --o orig_nu.mgz
>
> Linux IBT-MS-7971 4.2.0-36-generic #42~14.04.1-Ubuntu SMP Fri May 13
> 17:27:22 UTC 2016 x86_64 x86_64 x86_64 GNU/Linux
>
> recon-all -s bert5 exited with ERRORS at Fri Jun  3 14:55:29 IST 2016
>
> For more details, see the log file
> /media/brain/C60E9D2E0E9D188F/testFreesurfur/bert5/scripts/recon-all.log
> To report a problem, see
> http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
>
>
>    4) optionally include the subject's /script/recon-all.log
>
>
>
>
> --
> Dr. Siya Sherif Ph.D
> Senior R & D Engineer
> Neuroimaging & Neurospectroscopy Lab
> National Brain Research Centre
> NH-8, Manesar, Gurgaon
> Haryana-122 051 India
>
> email      : siya.phys...@gmail.com <mailto:siya.phys...@gmail.com> ,
> siya.she...@imdea.org <mailto:siya.she...@imdea.org>
> Tel (mob) : +91- 9447753634
>
>
> _______________________________________________
> Freesurfer mailing list
> Freesurfer@nmr.mgh.harvard.edu
> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>
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