Hello Siya, What version of perl is on your ubuntu system?
$> perl --version -Zeke On 06/05/2016 04:30 PM, siya sherif wrote: > > > FREESURFER_HOME: /usr/local/freesurfer > > Build stamp: freesurfer-Linux-centos6_x86_64-stable-pub-v5.3.0 > > Debian version: jessie/sid > > Kernel info: Linux 4.2.0-36-generic x86_64 > > --------------------------------------------------------------------- > Please include the following additional information in your report: > > 1) subject name > bret4 > > 2) the entire command-line executed > setenv SUBJECTS_DIR /media/brain/C60E9D2E0E9D188F/testFreesurfur > recon-all -i > ICBM_MNI_0101_MRI_T1-FFE_br_20050118145643139_S6730_I2233.nii -subject > bert3 -all > > > 3) the error message generated > > #-------------------------------------------- > #@# Talairach Fri Jun 3 14:54:45 IST 2016 > /media/brain/C60E9D2E0E9D188F/testFreesurfur/bert5/mri > > mri_nu_correct.mni --n 1 --proto-iters 1000 --distance 50 --no-rescale > --i orig.mgz --o orig_nu.mgz > > Linux IBT-MS-7971 4.2.0-36-generic #42~14.04.1-Ubuntu SMP Fri May 13 > 17:27:22 UTC 2016 x86_64 x86_64 x86_64 GNU/Linux > > recon-all -s bert5 exited with ERRORS at Fri Jun 3 14:55:29 IST 2016 > > For more details, see the log file > /media/brain/C60E9D2E0E9D188F/testFreesurfur/bert5/scripts/recon-all.log > To report a problem, see > http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting > > > 4) optionally include the subject's /script/recon-all.log > > > > > -- > Dr. Siya Sherif Ph.D > Senior R & D Engineer > Neuroimaging & Neurospectroscopy Lab > National Brain Research Centre > NH-8, Manesar, Gurgaon > Haryana-122 051 India > > email : siya.phys...@gmail.com <mailto:siya.phys...@gmail.com> , > siya.she...@imdea.org <mailto:siya.she...@imdea.org> > Tel (mob) : +91- 9447753634 > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.