It did not find any voxels in the ROI. This can happen for several reasons. First, check your registratoin (tkregister-sess). Second, it can happen because the size of the ROI is too small and does not occupy enough space in a voxel. Try changing the -fillthresh to something smaller than the default 0.5 (bet 0 and 1).
On 05/27/2016 04:08 PM, Sahil Bajaj wrote: > Hello FS experts, > > I am running a command "fcseed-sess -s S01 -cfg abc.config" to get > *.dat file for further analysis. I used the same steps to calculate FC > for 40 subjects, all steps run fine with 38 subjects but for 2 > subjects I am getting an error: Segmentation fault: Core dumped. > > I checked the segmentation of anatomical data (generated using > recon-all), and it looks fine to me. > Here I am also attaching the log file created when I run this command. > > Any help would be really appreciated. > > Thanks, > Sahil > -- > ------------------------------------------------- > Sahil Bajaj > Post-doctoral Fellow > Nantz National Alzheimer's Center, Department of Neurology > The Houston Methodist Research Institute (THMRI) > Houston, TX, USA. > E-mail:sahil.br...@gmail.com <mailto:e-mail%3asahil....@gmail.com> > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
