label2label and label2vol are options? mri_label2label --srclabel ROI.label --srcsubject fsaverage --trgsubject Control61 --trglabel prova.label --hemi rh --regmethod surface
I have tried the command line above ma the mask output is miss registered Stefano >----Messaggio originale---- >Da: Bruce Fischl <fis...@nmr.mgh.harvard.edu> >Data: 20-mag-2016 14.38 >A: <std...@virgilio.it>, "Freesurfer support list"<freesur...@nmr.mgh.harvard. edu> >Ogg: Re: [Freesurfer] R: MASK.label from fsaverage to volume in subject space > >sure, that should work > >cheers >Bruce >On Fri, 20 May 2016, std...@virgilio.it wrote: > >> Specifically, I have a .label from tksurfer and I would like to report this >> label on subj orig.nii.gz >> >> ----Messaggio originale---- >> Da: std...@virgilio.it >> Data: 20-mag-2016 10.36 >> A: <freesurfer@nmr.mgh.harvard.edu> >> Ogg: [Freesurfer] MASK.label from fsaverage to volume in subject >> space >> >> Hi list, >> to trasform a MASK.label (created by tk surfer) from surface to volume >> is correct to use: >> >> 1. mri_surf2surf to register the mask from fsaverage to subj space >> 2. mri_surf2vol to report the label (subj space) to volume (subj >> space) >> >> Thanks. >> >> >> Stefano >> >> >> >>_______________________________________________ >Freesurfer mailing list >Freesurfer@nmr.mgh.harvard.edu >https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > >The information in this e-mail is intended only for the person to whom it is >addressed. If you believe this e-mail was sent to you in error and the e-mail >contains patient information, please contact the Partners Compliance HelpLine at >http://www.partners.org/complianceline . If the e-mail was sent to you in error >but does not contain patient information, please contact the sender and properly >dispose of the e-mail. > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
