mkanalysis-sess -native -event-related -refeventdur 10 -paradigm aboutFace.para -nconditions 13 -TR 2.0000 -rlf rlf_aboutFace_subjvid -funcstem fm2tas1 -mask brain -analysis a_401_Av_s_task_fmov_bgrnd_icadenoise -taskreg taskreg_face__zmove.dat 1 -taskreg taskreg_face__bgrnd.dat 1 -taskreg noisereg__TCs_Milo_43.dat 43 -fsd bold -gammafit 0 8 -gammaexp 0.3 -polyfit 2 -acfbins 1 -nuisreg motion.dat 3 -force
I've attached example noisereg__TCs_Milo_43.dat and a log which I think includes relevant terminal outputs up to the error. Please let me know if I should provide more information. s *stephen v. shepherd phd* The Rockefeller University / 1230 York Avenue / New York NY 10065-6307 USA // 212.327.7699 On Wed, May 4, 2016 at 3:16 PM, Douglas N Greve <gr...@nmr.mgh.harvard.edu> wrote: > Can you send your mkanalysis-sess command? Can you also send one of the > regressor files? And can you send the full selxavg3 terminal output? > > On 05/04/2016 02:46 PM, S.V.Shepherd [work] wrote: > > I've modified an analysis to include a vector of noise time courses > > estimated using ICA. Since IC effects should be consistent across > > runs, I'm using taskregs instead of nuisregs. I can define the > > analysis and set up contrasts fine; however, when I run the analysis > > (selxavg3-sess), I get the following error: > > > > [...] > > Saving h.dat to > > > /Freiwald/sshepherd/imaging/aboutFace/merged_Milo/bold/a_401_Av_s_task_fmov_bgrnd_icadenoise/h.dat > > Error using zeros > > Size inputs must be integers. > > > > Error in fast_selxavg3 (line 1248) > > hhattmp = [zeros(Navgs_per_cond,nvox); hhattmp]; % Add zero for cond 0 > > > > >> ------------------------------------------ > > ERROR: fast_selxavg3() failed\n > > a_401_Av_s_task_fmov_bgrnd_icadenoise failed > > [...] > > > > ============================ > > > > Looking at h.dat, I notice "Nh" is set 3.625000e+00 rather than "1" as > > usual. > > > > Any tips on how to debug further? > > > > _stephen v. shepherd phd_ > > The Rockefeller University / 1230 York Avenue / New York NY 10065-6307 > > USA // 212.327.7699 > > > > > > _______________________________________________ > > Freesurfer mailing list > > Freesurfer@nmr.mgh.harvard.edu > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > -- > Douglas N. Greve, Ph.D. > MGH-NMR Center > gr...@nmr.mgh.harvard.edu > Phone Number: 617-724-2358 > Fax: 617-726-7422 > > Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting > FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 > www.nmr.mgh.harvard.edu/facility/filedrop/index.html > Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it > is > addressed. If you believe this e-mail was sent to you in error and the > e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. > >
noisereg__TCs_Milo_43.dat
Description: Binary data
selxavg3-sess-bold-a_401_Av_s_task_fmov_bgrnd_icadenoise-160504135301 - Copy.log
Description: Binary data
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