Hi Freesurfer users. I performed the recomended reconstruction of 82 subjects with Freesurfer.
The images used for this reconstruction were previously reoriented to AC-PC position, because they were previously used for SPM purposes. Now I'm trying to perform the FSFAST workflow, and I had to unpack the original functional DICOMs for each subject. Those images are not reoriented because they were not used until now. The question is: The functional images should be previously reoriented to the same position as the anatomical used in Freesurfer? Should I perform the recomended reconstruction again with the original DICOMS? Or it doesn't matter the reorientation of the functional/anatomical images and Freesurfer would perform correctly the FSFAST? (I hope so, so I could skip the reconstruction, which involves many hours of processing) Thanks.
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