Thanks Bruce, I have not used TRACULA before but I'll look into it. Does the tensor estimation have to be carried out using dtirecon for TRACULA or can I input tensor calculations from another software?
Thanks Laurena ________________________________________ From: freesurfer-boun...@nmr.mgh.harvard.edu <freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of Bruce Fischl <fis...@nmr.mgh.harvard.edu> Sent: 04 April 2016 15:45 To: Freesurfer support list Subject: Re: [Freesurfer] white matter parcellation Hi Laurena yes, this is what TRACULA does. Usually it requires diffusion data, but you might be able to run it without (which would amount to mapping the tracts from the atlas onto your individual subject). Perhaps Anastasia can comment? cheers Bruce On Mon, 4 Apr 2016, Holleran, Laurena wrote: > > Hello experts, > > > I wanted to know if there are any other white matter parcellation methods > being developed which specifically label white matter tracts? I know that > the wmparc voxel are assigned a label based on the piece of cortex that is > closest too it​, however a significant portion of the white matter remains > unclassified or "unknown". If there are no plans to develop an atlas of this > sort you can just let me know. > > > Many thanks. > > > > > ____________________________________________________________________________ > > > The materials in this message are private and may contain Protected > Healthcare Information or other information of a sensitive nature. If you > are not the intended recipient, be advised that any unauthorized use, > disclosure, copying or the taking of any action in reliance on the contents > of this information is strictly prohibited. If you have received this email > in error, please immediately notify the sender via telephone or return mail. > > > ________________________________ The materials in this message are private and may contain Protected Healthcare Information or other information of a sensitive nature. If you are not the intended recipient, be advised that any unauthorized use, disclosure, copying or the taking of any action in reliance on the contents of this information is strictly prohibited. If you have received this email in error, please immediately notify the sender via telephone or return mail. _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
