Hi Clara
the -cp and -wm both get run by -cp. So run that until the volume stream is
done and the orig surfaces are created (or just before if you want), then
run the perhemi I think.
cheers
Bruce
On Fri, 12 Feb 2016, Clara Kühn
wrote:
Dear FreeSurfer experts,
I hava a question regarding rerunning the recon-process. I have cases where I
do manual edits on a brain and only set a few control points on one hemisphere
but white matter edits on the other. I would then run the -cp flag for one
hemisphere and the -wm flag for the other. My question is, can that happen
simultaneously, i.e. in different terminals or should I do one after the other
because of some sort of interferences?
Also, I was wondering if it is possible to save surfaces from a BASE under a
different name, run the recon-process again and compare the new surfaces with
the old ones and then pick, if they are better, the old ones to go on to
calculate the LONGs?
Thanks,
Clara
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.
