Dear Bruce and Freesufers,
I tried to run the command and then to load it as an overlay - however I get nothing on the surface of the fsaverage brain. The program is telling me that it is including x-number of voxels into the mask but when I check I see nothing on the surface. What is going wrong here? Further the approach you proposed doing fMRI on the surface sounds interesting – but I have never used this approach. Could you give me a hint on the steps I need to take in order to do this? Thanks in advance! Eric yes, but do you want to do the fMRI analysis on the surface or in the volume? There are lots of advantages to doing it on the surface. If your sig.cluster.mgh was a surface overlay then the threholded.mgh might be exactly what you want. Load it on an inflated surface and take a look cheers Bruce
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
