Just specify gender as a factor then look at the contrasts where it says 
that gender is accounted for or regressed out. There is really no 
difference between a factor of interest and a nuisance factor, it is 
only a matter of interpretation

On 11/18/2015 02:04 PM, Tesse, Marcello wrote:
> Dear FreeSurfer experts,
> >
> >
> > I a PhD student at King's college London.
> >
> > I am running cortical thickness analysis with QDEC.
> >
> > I would like to investigate some cortical thickness differences
> > between 2 groups,
> >
> > using as nuisance factors 'age' and 'gender'.
> >
> >
> > No problem at all with age. But the gender as dicotomic variable is
> >
> > listed on fixed factor in qdec, in design window.
> >
> > My question is:
> >
> > how can I run the analysis using 'gender' as nuisance factor??
> >
> >
> >
> > thank you very much
> >
> > MARCELLO
>
>
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