Hi, We have run recon-all twice on a single subject, both times without any error. Using a functional localizer, we have made a surface-based label for an ROI (FFA) in the ventral temporal cortex of the inflated surface from the first recon. When we visualize the same label on the inflated surface of the second recon, the label shows up as scattered points in the lateral parietal cortex! Why do we see such a huge difference in the vertex coordinates across the two recons of a single subject?
Reza
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