One question about "-openmp". If I run multiple "recon-all" in different terminals without using this flag...
Is there any problem with the 'gcareg' stage? For example, is there any interference between subjects reconstruction? Thanks. 2015-10-16 15:07 GMT+02:00 Bruce Fischl <fis...@nmr.mgh.harvard.edu>: > Hi Linda > > did you actually include the angle brackets? If so, try without them. And > don't you want 4 there instead of 8 (if you have 4 processors)? > > On > Fri, 16 Oct 2015, Linda BOUMGHAR wrote: > > > I would like to use freesurfer with OpenMP, with 4 processors. I wrote > this : > > recon-all -all -i > > /mnt/linuxwin/lboumgha/data/CENTER_TBI/tro/suj1/T1.nii.gz -subjid > > subj1 -openmp <8> > > and I got this error message : > > > > bash: syntax error near unexpected token `8' > > > > What is the good syntax if I want tu use OpenMP, please? > > Great regards, > > Linda Boumghar > > > > ---------------------------------------------------------------- > > This message was sent using IMP, the Internet Messaging Program. > > > > > > _______________________________________________ > > Freesurfer mailing list > > Freesurfer@nmr.mgh.harvard.edu > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it > is > addressed. If you believe this e-mail was sent to you in error and the > e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. > >
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