Hi Noam we should just preserve whatever index they use
cheers Bruce On Fri, 30 Oct 2015, Peled, Noam wrote: > > Hey Bruce, > I meant for the Lausanne250 parcellation (http://journals.plos.org/plosone/a > rticle?id=10.1371/journal.pone.0048121) > The problem is with the #index column. To create a custom lookup table, I ne > ed to know what is the #index each label gets in the output file of > mri_aparc2aseg. > I want to users to be able to load this new mgz file into freeview with the > right lookup table. > Thanks, > Noam > On Fri, 30 Oct 2015, Bruce wrote: > > what is the laus250 parcellation? The lookup tables are in text so you > > should be able to open one in an editor and see what the format is. It's > > pretty straightforward. # lines are comments, then it is > > > <index #> <text name> <red> <green> <blue> <alpha (not used> > > > cheers > > Bruce > > > On Fri, 30 Oct 2015, Peled, Noam wrote: > > > Hey all, > > I used mri_aparc2aseg to map the cortical labels from the laus250 > > parcellation. > > Now I need to create a new lookup table, mainly for displaying the labels' > > > names in freeview. > > How can I know what id each label gets in my new laus+aseg.mgz file? > > > > Thanks, > > Noam > > _______________________________________________ > > Freesurfer mailing list > > Freesurfer@nmr.mgh.harvard.edu > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
