Hi Nathan you could just map the aparc+aseg to Tal coords, then load it into matlab and compute the average coordinate for each parcel. Note that the average isn't guaranteed to be within the parcel though. An alternative would be to compute the point that is the min average distance from all other points. It's a bit more compute-intensive but will be in the parcel
cheers Bruce On Wed, 21 Oct 2015, Nathan Malitz wrote: > Hi There, > Long time listener first time caller, > > I would like to generate a txt file, each line with 3 values for the XYZ in > normalised space, based on the centre of each free surfer cortical > parcellation, for each Subject run through freesurfer. > > Any chance someone could point me in the right direction for this? > > Kind regards, > > Nathan > > > > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
