Hi all, I am trying to "voxelize" the cortical surfaces generated in freesurfer and I am a little stuck.
I have been using mris_surf2vol with the --mask option however this generates a very speckled representation of the cortical surface on the voxels. What I would prefer would be the level sets of the cortical surface interpolated onto voxels, even if they are at a different resolution that could be enough. Is this possible with any of the available commands? I also went down the route of mris_volmask however, this generates the cortical ribbon, which is something that I don't need. Cheers, *Dr Kevin Aquino* Research fellow, Sir Peter Mansfield Magnetic Imaging Center, School of Physics & astronomy, The University of Nottingham. Honorary Research Fellow School of Physics, Faculty of Science, University of Sydney. *E* kevin.aqu...@nottingham.ac.uk, aqu...@physics.usyd.edu.au | *W* www.physics.usyd.edu.au/~aquino/ ---------------------------------------------- The brain is a wonderful organ. It starts working the moment you get up and does not stop until you get into the office. - Robert Frost CRICOS 00026A This email plus any attachments to it are confidential. Any unauthorised use is strictly prohibited. If you receive this email in error, please delete it and any attachments. Please think of our environment and only print this e-mail if necessary.
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