Hi list, I'm performing FS-FAST on rsfMRI.The seed is MRS voxel.I have run: 1-mri_convert MRS_MASK.nii.gz $SUBJECTS_DIR/MRS_MASK.mgz 2-fcseed-config -segid 1 -seg MRS_MASK.mgz -fsd rest -mean -cfg mean.MRS_MASK.config 3-fcseed-sess -sf sessid -cfg mean.MRS_MASK.config 4- mkanalysis-sess -analysis fc.MRS_MASK.surf.lh -surface fsaverage lh -fwhm 5 -notask -taskreg MRS_MASK.dat 1 -nuisreg vcsf.dat 5 -nuisreg wm.dat 5 -polyfit 5 -nskip 4 -mcextreg -fsd rest -TR 1.1 -per-run mkanalysis-sess -analysis fc.MRS_MASK.surf.rh -surface fsaverage rh -fwhm 5 -notask -taskreg MRS_MASK.dat 1 -nuisreg vcsf.dat 5 -nuisreg wm.dat 5 -polyfit 5 -nskip 4 -mcextreg -fsd rest -TR 1.1 -per-run mkanalysis-sess -analysis fc.MRS_MASK.mni305 -mni305 -fwhm 5 -notask -taskreg MRS_MASK.dat 1 -nuisreg vcsf.dat 5 -nuisreg wm.dat 5 -polyfit 5 -nskip 4 -mcextreg -fsd rest -TR 1.1 -per-run 5- selxavg3-sess -sf sessid -a fc.MRS_MASK.surf.lh selxavg3-sess -sf sessid -a fc.MRS_MASK.surf.rh selxavg3-sess -sf sessid -a fc.MRS_MASK.mni305 When I performed selxavg3-sess -sf sessid -a fc.MRS_MASK.surf.lh I obtained this error: $Id: fast_selxavg3.m,v 1.100.2.2 2012/11/30 18:40:38 greve Exp $ /Applications/freesurfer/fsfast/toolbox/fast_selxavg3.m /Applications/freesurfer/fsfast/toolbox/fast_ldanaflac.m /Applications/freesurfer/matlab/MRIread.m ------------------------- outtop = /Applications/freesurfer/subjects Extension format = nii.gz ERROR: cannot find volume matching /Applications/freesurfer/subjects/Sess101/rest/001/MRS_MASK.dat ERROR: loading nonpar reg /Applications/freesurfer/subjects/Sess101/rest/001/MRS_MASK.dat ------------------------------------------ ERROR: fast_selxavg3() failed\n PLEASE NOTE: MRS_MASK.dat is lacking in Sess101/rest/001. It is present only MRS_MASK without extension. Thanks,
Stefano
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