Hi Cristina
sorry, while thalamic nuclei are of interest to us we haven't developed
anything for labeling them yet.
cheers
Bruce
On Mon, 31 Aug 2015, Lois Gomez, Cristina wrote:
Dear all,
I am interested in analyzing thalamic sub-nuclei separately, instead of the
whole thalamus. I've noticed that in the FreeSurferColorLUT.txt file there
are some labels that correspond to thalamic sub-nuclei (Labels #No.
8001-8014). However, I do not find those labels in my aparc+aseg file, where
the highest number is 2035.
Is the thalamic sub-nuclei segmentation implemented in the current version
of FreeSurfer? If so, where can I find those labels?
Many thanks in advance!
Best regards,
Cristina
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