Hi Jen

I guess you would just use freeview to do the manual editing and then rerun 
the autorecon2/3 stages that come later.

cheers
Bruce

On Thu, 27 Aug 2015, Jennifer Eastman wrote:

> Hello All,
>
> I am hoping to make some edits to subcortical segmentations, and while I have 
> found instructions for manual edits, there are also stern warnings to avoid 
> these if possible and pursue automated avenues. I cannot, however, seem to 
> find clear instructions on how to automatically edit  the subcortical 
> segmentations. Can anyone clarify for me the process I should try prior to 
> manual editing? Thank you.
>
> Jen
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>
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