mricro -----Original Message----- From: freesurfer-boun...@nmr.mgh.harvard.edu [mailto:freesurfer-boun...@nmr.mgh.harvard.edu] On Behalf Of Douglas N Greve Sent: Tuesday, June 09, 2015 3:16 PM To: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] bad magic number
how was it created? On 06/09/2015 04:03 PM, Kriegel, Jennifer Lynn Sarai wrote: > MRIcro opens it, and so does SPM 8. > > > > -----Original Message----- > From: freesurfer-boun...@nmr.mgh.harvard.edu > [mailto:freesurfer-boun...@nmr.mgh.harvard.edu] On Behalf Of Bruce > Fischl > Sent: Tuesday, June 09, 2015 3:02 PM > To: Freesurfer support list > Subject: Re: [Freesurfer] bad magic number > > Hi Jennifer > > can MRIcro read it? Usually that means it is corrupted Bruce > > > On Tue, 9 Jun 2015, Kriegel, Jennifer Lynn Sarai > wrote: > >> Hi, >> >> >> >> I’m getting a bad magic number error using mri_convert. I’m trying to >> convert a .nii file to a .mgz file. I’ve searched all over and all I >> can find is that you can use python in another program to delete this >> number, and it is related to the file extension. I’ve tried using the >> .nifti1 extension, as well as .nii, as I have a .img file in the >> folder as well, but then it doesn’t recognize the file extension. The >> files were converted using mricro from hdr/img MPRAGE files to correct >> orientation into the .nii files. >> >> >> >> I also tried using the original .hdr file to convert, and it spits >> out an orientation error. >> >> >> >> Any help would be appreciated. >> >> >> >> >> >> - Jennifer Lynn Sarai Kriegel >> >> MS in Psychological Sciences, Cognition and Neuroscience Emphasis >> >> Functional Neuroimaging of Memory Lab, Center for Vital Longevity >> >> The University of Texas at Dallas >> >> jlk130...@utdallas.edu >> >> ------------------------------------------------------------ >> >> I am looking for a lot of men who have an infinite capacity to not >> know what can't be done. >> >> - Henry Ford >> >> >> >> The important thing is not to stop questioning. Curiosity has its own >> reason for existing. >> >> - Albert Einstein >> >> >> >> >> > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
