Dear Freesurfer experts, I am working with the longitudinal stream and have come across medially crossing pial surfaces in the base of a few participants. I tried editing the aseg.mgz file and then running the process again with the -noaseg flag but that didn't help. It also seems that in the aseg.mgz the hemispheres are classified correctly, however in the aparc+aseg.mgz they are not. Might that be the problem and should I therefore edit the aparc+aseg.mgz only? What would be the respective flag to such edits? In the cheat sheet for the longitudinal stream I can only find edits to the aseg.mgz.
Kind regards, Clara Kühn -- Clara Kühn, Phd Student Max-Planck-Institute for Human Cognitive and Brain Science Department of Neuropsychology Stephanstrasse 1A 04103 Leipzig, Germany Phone: +49 341 - 9940 162 Fax: +49 341 - 9940 2260 Web: www.cbs.mpg.de E-Mail: kin...@cbs.mpg.de _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
