did this run correctly with just mri_glmfit? What was your mri_glmfit command line? Why are you running a simulation instead of using cached data?
doug On 03/21/2015 10:52 AM, Dídac Vidal wrote: > Dear Freesurfer users, > > I am trying to run mri_glmfit in simulation mode as the computed FWHM > is over 30 > > I run --> mri_glmfit-sim --glmdir GLMDIR > \--sim mc-z 10000 1.3 mc-z.abs.13 > \--sim-sign abs > > However I get an dimension mismatch error > > --> ERROR: dimension mismatch between X and contrast [...] X > has 6 cols, C has 7 cols > > Significantly the model included one per-vertex regressor (which is > the main reason why *mtx files have 7 cols) > > > Does anybody know how to solve this problem? > Should I create an extra column in the matrix? > > Thank you very much in advance > > -- > Dídac Vidal Piñeiro > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
