Hi Alan - Your culprit is here:

WARN: Could not find 
/data/alanf/FreeSurfer_5.3/diffusion_recons/105014/mri/aparc+aseg.mgz
WARN: You will not be able to complete TRACULA processing without it

You have to make sure your freesurfer recon is there, or define SUBJECTS_DIR appropriately if it's elsewhere.

Hope this helps,
a.y

On Thu, 26 Feb 2015, Alan Francis wrote:

Hi Anastasia:
Sorry to bother you again. I ran trac all  on our cluster but it gave me an 
error message. I have enclosed the text file. I used vim to see
if I could decipher the error but I am not entirely sure what the problem is

Please advice.

thanks,

Alan



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