Hi all, I'm trying to extract aseg and aparc stats. Aparc worked fine, but when I'm trying to extract aseg stats, I get the following warnings, then error:
Parsing the .stats files WARN: 3696 nmeasures = 66, expecting 55 WARN: 4455 nmeasures = 66, expecting 55 Building the table.. ERROR: All stat files should have the same segmentations If one or more stats file have different segs from others, use --common-segs or --all-segs flag depending on the need. If I use the -all-segs flag like it suggests, I end up with 0s in the following variables: BrainSegVol BrainSegVolNotVent BrainSegVolNotVentSurf SupraTentorialVolNotVent SupraTentorialVolNotVentVox MaskVol BrainSegVol-to-eTIV MaskVol-to-eTIV lhSurfaceHoles rhSurfaceHoles SurfaceHoles EstimatedTotalIntraCranialVol I've run this command before and never ran into this issue. Do you have any ideas for how to extract the necessary volume information without errors? Thanks, Maria -- Maria Kharitonova, PhD Research Assistant Professor Department of Medical Social Sciences Northwestern University Feinberg School of Medicine 625 N. Michigan Ave, Suite 2700 Chicago, IL 60611 Phone: (312) 503-6503 Email: maria.khariton...@northwestern.edu
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