Hi folks, I am using the parcellation of Freesurfer for some other analyses. I see that the parcellation if obtained rather late in the pipeline: http://surfer.nmr.mgh.harvard.edu/fswiki/recon-all
However, asking does not hurt: is there any short route to get the Desikan parcellation without doing the entire recon-all pipeline? I am not interested in thickness, template registration, etc. I need only the parcellation of gray matter in native space. Advice on other tools that can run parcellation quickly is also welcome. Dorian UPenn
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