Hi Lilla, I would be interested in any tips on processing neonate scans as well. Currently we are wanting to process subjects of 1 month up until 2 years of age through Freesurfer. Help is very much appreciated.
Kind regards, Fraukje Coopmans PhD Student | Department Psychiatry | Brain Division | University Medical Center Utrecht Room B01.113 | M +31 646 28 04 00 | E f.m.t.coopm...@umcutrecht.nl On 06 Feb 2015, at 19:03, Lilla Zollei <lzol...@nmr.mgh.harvard.edu> wrote: > > Hi Shaheen, > > Freesurfer does not handle that age-range so it is not applicable for > neonates. > > Send me an email and I will tell you what we are developing now that might be > appropriate for you. > > Lilla > > On Fri, 6 Feb 2015, Shaheen Ahmed wrote: > >> Hello, >> I am using freesurfer for neonates but get error at the topology >> construction (excessive topological defect encountered, could not allocate >> edges for retesselation). My question is >> 1) is the freesurfer applicable for neonates? I have tried it for 2 year to >> 9 year old kid it worked fine. >> 2) I tried the -old fixer flag and tried to run the recon -all but i get the >> same error. >> Any suggestions are appreciated. >> Thanks, >> Shaheen >> _________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________ >> UT Southwestern >> Medical Center >> The future of medicine, today. > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it is > addressed. If you believe this e-mail was sent to you in error and the e-mail > contains patient information, please contact the Partners Compliance HelpLine > at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. ------------------------------------------------------------------------------ De informatie opgenomen in dit bericht kan vertrouwelijk zijn en is uitsluitend bestemd voor de geadresseerde. Indien u dit bericht onterecht ontvangt, wordt u verzocht de inhoud niet te gebruiken en de afzender direct te informeren door het bericht te retourneren. Het Universitair Medisch Centrum Utrecht is een publiekrechtelijke rechtspersoon in de zin van de W.H.W. (Wet Hoger Onderwijs en Wetenschappelijk Onderzoek) en staat geregistreerd bij de Kamer van Koophandel voor Midden-Nederland onder nr. 30244197. Denk s.v.p aan het milieu voor u deze e-mail afdrukt. ------------------------------------------------------------------------------ This message may contain confidential information and is intended exclusively for the addressee. If you receive this message unintentionally, please do not use the contents but notify the sender immediately by return e-mail. University Medical Center Utrecht is a legal person by public law and is registered at the Chamber of Commerce for Midden-Nederland under no. 30244197. Please consider the environment before printing this e-mail.
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