Hi Mohammad,

the thickness can be displayed as a map on any surface we create. We do create ?h.sphere files by default, so you can use those if you want. If you'd rather a planar representation you need to make cuts in the inflated surface and use mris_flatten.

cheers
Bruce


On Wed, 21 Jan 2015, Zia, Mohammad wrote:


Hi,

Is it possible to get over some 2D representation of the cortex (whether it's 
on a plane,
on the surface of a sphere, it doesn't matter (although the plane would 
probably be
easiest to work with))  to get cortical thickness measures  at every location? 

Thanks,
--Mohammad 


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