Hi, I am currently only able to open a thickness map for a single subject using "tksurfer SUBJECT lh inflated". I can use the analysis figures from qdec, but I'd really like to plot the mean thickness for a particular group to compare to others visually. Is this possible?
Thanks, Amanda ________________________________________ From: freesurfer-boun...@nmr.mgh.harvard.edu <freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of Douglas N Greve <gr...@nmr.mgh.harvard.edu> Sent: 14 January 2015 23:46 To: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] Viewing QDEC results in tksurfer what is your tksurfer command line? On 01/13/2015 07:12 AM, Worker, Amanda wrote: > > Hi, > > > Is it possible to view the results of a qdec analysis (correlation > with a single continuous group) in tksurfer? I am currently unable to > open it and I'm getting an error saying "could not open > file */mri/transforms/talairach.xfm ..no such file or directory" . Is > this a file that is not created with qdec? > > > I'm also trying to visualise group mean thickness' in different > colours to allow difference between groups, that are not significant > in the analysis to be visualised. I cannot find any advice on how to > do this, is this something it's possible to do using either freeview > of tksurfer? > > > Thanks, > > > Amanda > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
